BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025B03LP1|AL428327
(922 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1354 1145 0.0
>3x_Contig1354
Length = 7778
Score = 1145 bits (577), Expect = 0.0
Identities = 607/618 (98%)
Strand = Plus / Plus
Query: 1 tatctttgaaactggtaatcttgaagatcatttctataagttagaaatggaattatgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1799 tatctttgaaactggtaatcttgaagatcatttctataagttagaaatggaattatgcag 1858
Query: 61 ggacgcttttactcaacaattcactgtgtctaccatttgggcttggatgaagtctagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1859 ggacgcttttactcaacaattcactgtgtctaccatttgggcttggatgaagtctagaga 1918
Query: 121 gcaagaagttagaaacataacatggatcgctgaatgtatcgcacaaaatcaaaagtctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1919 gcaagaagttagaaacataacatggatcgctgaatgtatcgcacaaaatcaaaagtctaa 1978
Query: 181 gatcaataactacatttctgtgtattaactaaaccaaaaaatttcagtcattaaatggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1979 gatcaataactacatttctgtgtattaactaaaccaaaaaatttcagtcattaaatggta 2038
Query: 241 aaacaatatatgtatgtatatttatatatatatatatgttactaaactaggataataatc 300
||||||||||||||||||||||||||||||||||||| | ||| || |||||||||||
Sbjct: 2039 aaacaatatatgtatgtatatttatatatatatatatctcacttttcttggataataatc 2098
Query: 301 gactcatagtttcatcgatcatgagctcattacaatttgagccaaatagagataatataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2099 gactcatagtttcatcgatcatgagctcattacaatttgagccaaatagagataatataa 2158
Query: 361 tacaatgggatcgacgtcacttgcgttcttcaatgcggcaattttagctatgtttaacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2159 tacaatgggatcgacgtcacttgcgttcttcaatgcggcaattttagctatgtttaacat 2218
Query: 421 gctggctcaaattattacctcaatacacctagaggtatcttccatggtcaaaaatacaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2219 gctggctcaaattattacctcaatacacctagaggtatcttccatggtcaaaaatacaga 2278
Query: 481 tttggagccaggcgatggttcgaatcgagtagctggaataccaccttggtaaatatgagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2279 tttggagccaggcgatggttcgaatcgagtagctggaataccaccttggtaaatatgagc 2338
Query: 541 csttttgcattgngnnacatcaattctttttaatggagcatacccaccaagtaaggaatc 600
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2339 atttttgcattgagaaacatcaattctttttaatggagcatacccaccaagtaaggaatc 2398
Query: 601 aacaccagatctagtagc 618
||||||||||||||||||
Sbjct: 2399 aacaccagatctagtagc 2416
Score = 500 bits (252), Expect = e-141
Identities = 268/274 (97%)
Strand = Plus / Plus
Query: 649 aagttttctcaagtgcatagaaatgtttagaagggaaatatcacttacggccctgcgcaa 708
||||||| | ||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 2447 aagttttataaagtgcatagaaatgtttagaagggaaatattacttacgggcctgcgcaa 2506
Query: 709 aagctgatgtctaattcttccaggttttgaccaccgacacataataattcaatcgctaca 768
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2507 aagttgatgtctaattcttccaggttttgaccaccgacacataataattcaatcgctaca 2566
Query: 769 tctgttaaagagcagcagaatgacagatttaagtgagacaagtttggacaaccgtttact 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2567 tctgttaaagagcagcagaatgacagatttaagtgagacaagtttggacaaccgtttact 2626
Query: 829 attgatcgaatagaattatcagtcaaaaatatacattcactcacaatcaaggtcttcaag 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2627 attgatcgaatagaattatcagtcaaaaatatacattcactcacaatcaaggtcttcaag 2686
Query: 889 ttggggaacgactgatacgcccaataagagamcc 922
||||||||||||||||||||||||||||||| ||
Sbjct: 2687 ttggggaacgactgatacgcccaataagagaacc 2720
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,221
Number of Sequences: 1807
Number of extensions: 11221
Number of successful extensions: 1298
Number of sequences better than 1.0e-20: 1
length of query: 922
length of database: 10,358,551
effective HSP length: 16
effective length of query: 906
effective length of database: 10,329,639
effective search space: 9358652934
effective search space used: 9358652934
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)